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EEG Connectivity Lab with Python: From Data to Publication
Role Play
New
Rating: 4.4 out of 5(4 ratings)
126 students

EEG Connectivity Lab with Python: From Data to Publication

Analyze connectivity with real EEG data using MNE-Python
Last updated 9/2026
English
Arabic [Auto],English [Auto],

What you'll learn

  • Understand the fundamental concepts and challenges of EEG connectivity analysis.
  • Prepare and analyze EEG data using simple and easy practical Python-based workflows.
  • Select appropriate connectivity methods for different research questions.
  • Visualize, interpret, and communicate EEG connectivity findings.

Course content

7 sections • 40 lectures • 6h 33m total length
  • A Short History13:55
  • What is EEG Connectivity9:31

    Explore EEG connectivity as coordinated brain-region activity, covering time, frequency, and time-frequency analyses, two connectivity types (phase-based and power-based), and the role of volume conduction.

  • Volume Conduction12:05
  • Understanding the Concept of Phase16:53
  • Visualizing Phase in Python3:54
  • From Phase to Connectivity in the Brain7:56
  • Phase–Amplitude Coupling7:23

    Understand phase amplitude coupling (pac) by linking slow rhythm phase to fast oscillation amplitude, using theta and gamma examples, and learn to measure and visualize pac in python.

  • Check Your Understanding of EEG Connectivity
  • Can We Really Call This Brain Connectivity?

Requirements

  • Basic familiarity with EEG or neuroscience is helpful but not required. No advanced programming experience is necessary.

Description

Learn how to analyze and visualize EEG connectivity using Python through clear explanations, simple code, and real EEG data. EEG connectivity can help us understand how different brain regions communicate. However, the available methods, mathematical concepts, and programming tools can make this topic difficult to approach.

This course provides a practical and beginner-friendly path from the fundamental concepts of EEG connectivity to the creation of publication-quality figures. You will first learn essential concepts such as volume conduction, phase, amplitude. Through guided Python labs, you will explore several widely used forms of EEG connectivity, including:


• Phase-locking value (PLV)

• Phase–amplitude coupling (PAC)

• Power correlation between EEG channels

• Within-frequency and cross-frequency power relationships

• Connectivity matrices and network visualization

• Visual comparison of connectivity between experimental conditions


The practical exercises use real EEG recordings. The code is intentionally kept simple, clearly explained, and easy to adapt to your own EEG datasets. By the end of the course, you will be able to select an appropriate connectivity approach, perform a basic EEG connectivity analysis in Python, interpret the resulting measures, and create clear figures suitable for presentations, reports, or scientific publications.
This course is designed for students, researchers, and professionals in neuroscience, psychology, biomedical engineering, cognitive science, and related fields who have a basic understanding of EEG and want practical experience with connectivity analysis.
This is an introductory course designed to provide a practical understanding of the core concepts of EEG connectivity. The analyses are intentionally kept at a basic level; advanced mathematical theory, complex statistical methods, and specialized connectivity models are beyond the scope of this course.

Who this course is for:

  • Students and researchers in neuroscience, psychology, cognitive science, biomedical engineering, and related fields.
  • EEG users who want to understand connectivity concepts and apply them through practical Python analyses.
  • Graduate students and early-career researchers who want to analyze, visualize, interpret, and report EEG connectivity findings.