
Explore how cells identify and repair DNA damage using base excision repair, nucleotide excision repair, mismatch repair, and double-strand break repair to preserve genetic information.
Identify and remove damaged bases, create an AP site, and replace with the correct nucleotides via base excision repair.
Explore nucleotide excision repair of bulky DNA damage from UV light and ionizing radiation, including cross-linkages, where excision nuclease removes lesions and DNA polymerase reseals the strand.
Explores how double-strand breaks damage chromosomes and how cells repair them through homologous recombination or non-homologous recombination, with outcomes including chromosomal translocations and implications for cancer.
Examine four dna repair methods, from damage identification to removal and replacement of nucleotides, ending with sealing, and consider implications for cancer and brain-related syndromes.
Learn how DNA ligation joins fragments with sticky ends using ligase to form recombinant plasmids for cloning. Restriction enzymes create overhangs, with ATP cofactors enabling ligation and transformation for propagation.
Compare blunt-end ligation with sticky-end cloning, and show how pcr enables generation of dna fragments, while phosphorylation and atp concentrations affect ligation efficiency in cloning.
Explore restricted endonucleases and artificial restriction enzymes, including type II enzymes, zinc finger nucleases, and TALENs, and learn how guide RNA targets non-palindromic sequences in genetic engineering.
Introduction
Base excision repair
Nucleotide repair
Mismatch repair
Double standard repair
Applications
DNA ligation sticky ends
Blunt ends
restricted endonuclease part1
restricted endonuclease part2
DNA repair definition
DNA repair is a collection of processes by which a cell identifies and corrects damage to the DNA molecules that encode its genome.
Who discovered DNA repair
Tomas Lindahl, Paul Modrich and Aziz Sancar are awarded the Nobel Prize in Chemistry 2015 for having mapped and explained how the cell repairs its DNA and safeguards the genetic information.
Damaged to DNA caused by replication errors or mutations may have serious consequences.
The cell possesses an inbuilt system to repair the damaged DNA .
This may be achieved by 4 distinct mechanisms.
1.Base excision repair
2.nucleotide excision repair
3.Mismatch repair
4.Double strand break repair.
Base Excision Repair is a repair mechanism that corrects damaged DNA by identifying damaged bases and replacing damaged bases with the correct nucleotide.
The correct nucleotide can be identified by referencing the complementary strand in the DNA pair based on the Watson-Crick DNA base pairing.
DNA bases are constantly subjected to damages like deamination or alkylation. The damaged base is often called the "A basic Site" or "AP site".
Damaged bases are first identified by DNA glycosylases. DNA glycosylases are enzymes that are capable of detecting initial lesions of DNA.
you can find more details in presentation slides.